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The statistical language R has proven to be a popular choice among statisticians, researchers, and organizations for statistical analysis and graphs. This is partly due to the free nature of the program and the power of its programming capabilities. Other strengths include its exceptionally good support, its continual improvement (updates occur almost monthly at times), and its very active user community. R is a model example of the benefits of free and open-source software, and a wealth of contributed documentation is freely available. In recent years, the R language has amassed a growing, and very strong, supporting literature, which consists of several introductory texts and companions to existing textbooks and which implements modern statistical methods, regression modeling strategies, and specialized types of models. R integrates very well with LaTeX and also has very powerful graphics capabilities. For some, the lack of a powerful graphical user interface (i.e., a point-and-click operation) is one of R's most glaring weaknesses.
Presently, R is an open-source software for statistical computing and graphics that can be freely downloaded from the R-project website and runs on several operating systems, such as Mac OS X, Microsoft Windows, and several UNIX platforms. This entry describes the history, general characteristics, and strengths and weaknesses of R and compares R with other statistical software.
History
In the early 1990s two professors, Ross Ihaka and Robert Gentleman, at the University of Auckland became interested in developing a statistical software that could be used to teach their introductory data analysis courses and that ran efficiently in their teaching laboratories. Since both authors were familiar with the S language, created in the Bell Laboratories by Rick Becker, John Chambers, and Allan Wilks, R was developed as an implementation of S. It gained its name partially as a play on the name S and partially due to the authors’ first names starting with the letter R. An initial version of R was made available to the public in 1993 at StatLib, a system for electronically distributing statistical software. After much constructive feedback and encouragement, Ihaka and Gentleman made the source code available in 1995. Then 2 years later, as a result of the large volume of suggestions and contributions overwhelming their capacity to make changes to the source code and report back to the community, a core group of developers was established to make changes to the source code, and The R Project was born. As The R Project grew, its goals shifted toward optimizing and expanding R's capabilities while continuing to provide support and maintenance for the software.
General Characteristics
R is a command-based environment that supports a wide variety of statistical and mathematical operations. At its simplest function level, R can be used as a calculator, and at higher levels it can execute complex simulations and statistical analyses.
Data Type and Objects
The items that R operates on include vectors and matrices of numerical or logical values and vectors of character strings. Such items can be assigned to objects that can be saved into files and used in later functions. During any session, the names of all objects in use (the workspace) can be accessed with the command:
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- Descriptive Statistics
- Distributions
- Graphical Displays of Data
- Hypothesis Testing
- Alternative Hypotheses
- Beta
- Critical Value
- Decision Rule
- Hypothesis
- Nondirectional Hypotheses
- Nonsignificance
- Null Hypothesis
- One-Tailed Test
- p Value
- Power
- Power Analysis
- Significance Level, Concept of
- Significance Level, Interpretation and Construction
- Significance, Statistical
- Two-Tailed Test
- Type I Error
- Type II Error
- Type III Error
- Important Publications
- “Coefficient Alpha and the Internal Structure of Tests”
- “Convergent and Discriminant Validation by the Multitrait-Multimethod Matrix”
- “Meta-Analysis of Psychotherapy Outcome Studies”
- “On the Theory of Scales of Measurement”
- “Probable Error of a Mean, The”
- “Psychometric Experiments”
- “Sequential Tests of Statistical Hypotheses”
- “Technique for the Measurement of Attitudes, A”
- “Validity”
- Aptitudes and Instructional Methods
- Doctrine of Chances, The
- Logic of Scientific Discovery, The
- Nonparametric Statistics for the Behavioral Sciences
- Probabilistic Models for Some Intelligence and Attainment Tests
- Statistical Power Analysis for the Behavioral Sciences
- Teoria Statistica Delle Classi e Calcolo Delle Probabilità
- Inferential Statistics
- Association, Measures of
- Coefficient of Concordance
- Coefficient of Variation
- Coefficients of Correlation, Alienation, and Determination
- Confidence Intervals
- Margin of Error
- Nonparametric Statistics
- Odds Ratio
- Parameters
- Parametric Statistics
- Partial Correlation
- Pearson Product-Moment Correlation Coefficient
- Polychoric Correlation Coefficient
- Q-Statistic
- R2
- Randomization Tests
- Regression Coefficient
- Semipartial Correlation Coefficient
- Spearman Rank Order Correlation
- Standard Error of Estimate
- Standard Error of the Mean
- Student's t Test
- Unbiased Estimator
- Weights
- Item Response Theory
- Mathematical Concepts
- Measurement Concepts
- Organizations
- Publishing
- Qualitative Research
- Reliability of Scores
- Research Design Concepts
- Aptitude-Treatment Interaction
- Cause and Effect
- Concomitant Variable
- Confounding
- Control Group
- Interaction
- Internet-Based Research Method
- Intervention
- Matching
- Natural Experiments
- Network Analysis
- Placebo
- Replication
- Research
- Research Design Principles
- Treatment(s)
- Triangulation
- Unit of Analysis
- Yoked Control Procedure
- Research Designs
- A Priori Monte Carlo Simulation
- Action Research
- Adaptive Designs in Clinical Trials
- Applied Research
- Behavior Analysis Design
- Block Design
- Case-Only Design
- Causal-Comparative Design
- Cohort Design
- Completely Randomized Design
- Cross-Sectional Design
- Crossover Design
- Double-Blind Procedure
- Ex Post Facto Study
- Experimental Design
- Factorial Design
- Field Study
- Group-Sequential Designs in Clinical Trials
- Laboratory Experiments
- Latin Square Design
- Longitudinal Design
- Meta-Analysis
- Mixed Methods Design
- Mixed Model Design
- Monte Carlo Simulation
- Nested Factor Design
- Nonexperimental Design
- Observational Research
- Panel Design
- Partially Randomized Preference Trial Design
- Pilot Study
- Pragmatic Study
- Pre-Experimental Designs
- Pretest-Posttest Design
- Prospective Study
- Quantitative Research
- Quasi-Experimental Design
- Randomized Block Design
- Repeated Measures Design
- Response Surface Design
- Retrospective Study
- Sequential Design
- Single-Blind Study
- Single-Subject Design
- Split-Plot Factorial Design
- Thought Experiments
- Time Studies
- Time-Lag Study
- Time-Series Study
- Triple-Blind Study
- True Experimental Design
- Wennberg Design
- Within-Subjects Design
- Zelen's Randomized Consent Design
- Research Ethics
- Research Process
- Clinical Significance
- Clinical Trial
- Cross-Validation
- Data Cleaning
- Delphi Technique
- Evidence-Based Decision Making
- Exploratory Data Analysis
- Follow-Up
- Inference: Deductive and Inductive
- Last Observation Carried Forward
- Planning Research
- Primary Data Source
- Protocol
- Q Methodology
- Research Hypothesis
- Research Question
- Scientific Method
- Secondary Data Source
- Standardization
- Statistical Control
- Type III Error
- Wave
- Research Validity Issues
- Bias
- Critical Thinking
- Ecological Validity
- Experimenter Expectancy Effect
- External Validity
- File Drawer Problem
- Hawthorne Effect
- Heisenberg Effect
- Internal Validity
- John Henry Effect
- Mortality
- Multiple Treatment Interference
- Multivalued Treatment Effects
- Nonclassical Experimenter Effects
- Order Effects
- Placebo Effect
- Pretest Sensitization
- Random Assignment
- Reactive Arrangements
- Regression to the Mean
- Selection
- Sequence Effects
- Threats to Validity
- Validity of Research Conclusions
- Volunteer Bias
- White Noise
- Sampling
- Cluster Sampling
- Convenience Sampling
- Demographics
- Error
- Exclusion Criteria
- Experience Sampling Method
- Nonprobability Sampling
- Population
- Probability Sampling
- Proportional Sampling
- Quota Sampling
- Random Sampling
- Random Selection
- Sample
- Sample Size
- Sample Size Planning
- Sampling
- Sampling and Retention of Underrepresented Groups
- Sampling Error
- Stratified Sampling
- Systematic Sampling
- Scaling
- Software Applications
- Statistical Assumptions
- Statistical Concepts
- Autocorrelation
- Biased Estimator
- Cohen's Kappa
- Collinearity
- Correlation
- Criterion Problem
- Critical Difference
- Data Mining
- Data Snooping
- Degrees of Freedom
- Directional Hypothesis
- Disturbance Terms
- Error Rates
- Expected Value
- Fixed-Effects Models
- Inclusion Criteria
- Influence Statistics
- Influential Data Points
- Intraclass Correlation
- Latent Variable
- Likelihood Ratio Statistic
- Loglinear Models
- Main Effects
- Markov Chains
- Method Variance
- Mixed- and Random-Effects Models
- Models
- Multilevel Modeling
- Odds
- Omega Squared
- Orthogonal Comparisons
- Outlier
- Overfitting
- Pooled Variance
- Precision
- Quality Effects Model
- Random-Effects Models
- Regression Artifacts
- Regression Discontinuity
- Residuals
- Restriction of Range
- Robust
- Root Mean Square Error
- Rosenthal Effect
- Serial Correlation
- Shrinkage
- Simple Main Effects
- Simpson's Paradox
- Sums of Squares
- Statistical Procedures
- Accuracy in Parameter Estimation
- Analysis of Covariance (ANCOVA)
- Analysis of Variance (ANOVA)
- Barycentric Discriminant Analysis
- Bivariate Regression
- Bonferroni Procedure
- Bootstrapping
- Canonical Correlation Analysis
- Categorical Data Analysis
- Confirmatory Factor Analysis
- Contrast Analysis
- Descriptive Discriminant Analysis
- Discriminant Analysis
- Dummy Coding
- Effect Coding
- Estimation
- Exploratory Factor Analysis
- Greenhouse-Geisser Correction
- Hierarchical Linear Modeling
- Holm's Sequential Bonferroni Procedure
- Jackknife
- Latent Growth Modeling
- Least Squares, Methods of
- Logistic Regression
- Mean Comparisons
- Missing Data, Imputation of
- Multiple Regression
- Multivariate Analysis of Variance (MANOVA)
- Pairwise Comparisons
- Path Analysis
- Post Hoc Analysis
- Post Hoc Comparisons
- Principal Components Analysis
- Propensity Score Analysis
- Sequential Analysis
- Stepwise Regression
- Structural Equation Modeling
- Survival Analysis
- Trend Analysis
- Yates's Correction
- Statistical Tests
- Bartlett's Test
- Behrens-Fisher t′ Statistic
- Chi-Square Test
- Duncan's Multiple Range Test
- Dunnett's Test
- F Test
- Fisher's Least Significant Difference Test
- Friedman Test
- Honestly Significant Difference (HSD) Test
- Kolmogorov-Smirnov Test
- Kruskal-Wallis Test
- Mann-Whitney U Test
- Mauchly Test
- McNemar's Test
- Multiple Comparison Tests
- Newman-Keuls Test and Tukey Test
- Omnibus Tests
- Scheffé Test
- Sign Test
- t Test, Independent Samples
- t Test, One Sample
- t Test, Paired Samples
- Tukey's Honestly Significant Difference (HSD)
- Welch's t Test
- Wilcoxon Rank Sum Test
- z Test
- Theories, Laws, and Principles
- Bayes's Theorem
- Central Limit Theorem
- Classical Test Theory
- Correspondence Principle
- Critical Theory
- Falsifiability
- Game Theory
- Gauss-Markov Theorem
- Generalizability Theory
- Grounded Theory
- Item Response Theory
- Occam's Razor
- Paradigm
- Positivism
- Probability, Laws of
- Theory
- Theory of Attitude Measurement
- Weber-Fechner Law
- Types of Variables
- Validity of Scores
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