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Contrast Analysis

A standard analysis of variance (ANOVA) provides an F test, which is called an omnibus test because it reflects all possible differences between the means of the groups analyzed by the ANOVA. However, most experimenters want to draw conclusions more precise than “the experimental manipulation has an effect on participants’ behavior.” Precise conclusions can be obtained from contrast analysis because a contrast expresses a specific question about the pattern of results of an ANOVA. Specifically, a contrast corresponds to a prediction precise enough to be translated into a set of numbers called contrast coefficients, which reflect the prediction. The correlation between the contrast coefficients and the observed group means directly evaluates the similarity between the prediction and the results.

When performing a contrast analysis, one needs to distinguish whether the contrasts are planned or post hoc. Planned, or a priori, contrasts are selected before running the experiment. In general, they reflect the hypotheses the experimenter wants to test, and there are usually few of them. Post hoc, or a posteriori (after the fact), contrasts are decided after the experiment has been run. The goal of a posteriori contrasts is to ensure that unexpected results are reliable.

When performing a planned analysis involving several contrasts, one needs to evaluate whether these contrasts are mutually orthogonal or not. Two contrasts are orthogonal when their contrast coefficients are uncorrelated (i.e., their coefficient of correlation is zero). The number of possible orthogonal contrasts is one less than the number of levels of the independent variable.

All contrasts are evaluated by the same general procedure. First, the contrast is formalized as a set of contrast coefficients (also called contrast weights). Second, a specific F ratio (denoted Fψ) is computed. Finally, the probability associated with Fψ is evaluated. This last step changes with the type of analysis performed.

Research Hypothesis as a Contrast Expression

When a research hypothesis is precise, it is possible to express it as a contrast. A research hypothesis, in general, can be expressed as a shape, a configuration, or a rank ordering of the experimental means. In all these cases, one can assign numbers that will reflect the predicted values of the experimental means. These numbers are called contrast coefficients when their mean is zero. To convert a set of numbers into a contrast, it suffices to subtract their mean from each of them. Often, for convenience, contrast coefficients are expressed with integers.

For example, assume that for a four-group design, a theory predicts that the first and second groups should be equivalent, the third group should perform better than these two groups, and the fourth group should do better than the third with an advantage of twice the gain of the third over the first and the second. When translated into a set of ranks, this prediction gives

C1C2C3C4Mean
11242

After subtracting the mean, we get the following contrast:

C1C2C3C4
Mean−1−1020

In case of doubt, a good heuristic is to draw the predicted configuration of results, and then to represent the position of the means by ranks.

A Priori Orthogonal Contrasts

For Multiple Tests

When several contrasts are evaluated, several statistical tests are performed on the same data set, and this increases the probability of a Type I error (i.e., rejection of the null hypothesis when it is true). In order to control the Type I error at the level of the set (also known as the family) of contrasts, one needs to correct the α level used to evaluate each contrast. This correction for multiple contrasts can be done with the use of the Šidák equation, the Bonferroni (also known as Boole, or Dunn) inequality, or the Monte Carlo technique.

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